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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015950714.1_cds_XP_016491031.1_81394
CDS Infomation

[gene=LOC107810735] [db_xref=GeneID:107810735] [protein=polygalacturonase-like] [protein_id=XP_016491031.1] [location=join(12782..13225,13482..13771,13963..14191,14282..14503)] [gbkey=CDS]
Sequence

ATGGCTAAGCTTTTAATTCCTTGGTGTTGTGTCTACTTGTTTTGTTTTGGATTGATTTTC
TTGAAATCAAACGCAGCATCAGTAACGTACAATGTATTGAGCTTTGGAGCAAAATCAGAC
GGCAAAAGTGATGCAACTCAGCCATTTGTGAAAGCATGGGTTGCTGCATGCAGCTCAGTG
AAGTCAGCCACCATTTACGTTCCTGGTGGACAGTACTTAATTAAGGCTGCAACATTTAGA
GGGCCATGCAAAAGTAAAATCACTGTAAAAATCGATGGAACTCTTGTGGCTCCGTCGGAT
TATCGCGCCGTTGGCAACTCCGGCTACTGGATTTTGTTCATTCAAGTTAACCGGATTTCG
GTCATAGGAGGAACTCTTGATGGAAATGGAGCTGGATTTTGGGCTTGCCGGAAGTCAGGG
AAGAATTGCCCTGTTGGAGCTAGGTCTATAACGTTCAACTGGGCAAATGATGTTGAGATT
GAAGGCTTAACATCAGTCAATAGCCAGTTAATGCACTTGGTAATAAATAGCTGCAAGAAT
GTGATGGTTAAAAATGTAAGAATAATAGCACCAGAGTTAAGTCCCAATACTGATGGCATT
CATGTCCAATCTTCAACTGGTGTTACTATCACTGGGACAAGTATCAAAACTGGAGATGAT
TGTATATCTATTGGCCCTGGCACAAGAAACCTTTGGATGGAGAAGATTCAATGTGGACCT
GGACATGGTGTTAGCATTGGAAGTCTAGCAAGAGATTACAAAGAAGATGGTGTGCAGAAC
GTGACATTAATTAATTCAGTGTTCACTGGATCTGATAATGGATTAAGGATAAAGTCTTGG
GCAAGACCCAGCACTGGTTTTGTCACTAACATTAATTATCAAAACATTATCATGAGGAAT
GTTGACAACCCAATCATCATTGATCAAAATTACTGTCCCAACAACCAAGGCTGTCCAGGC
CAGACTTCTGGTGTAAAGATCAATCAAGTGACATATCAAAATATATTAGGAACATCAGCA
ACGCAAGTAGCCATGACTTTTGACTGCAGTCCAAGCAATCCATGCAGTGGAATAAAGTTA
CAAGACATAAAGCTTACTTATTTGAACGGAAAAGCTCAACCTATTTGCAAGAATATTAGA
GGAAATACTGGAGGAATCATCTTGCCTCATAATTGTTTATATTAA

Peptide Sequence

PEP ID

XP_016491031.1
PEP Infomation

PREDICTED: polygalacturonase-like [Nicotiana tabacum]
Sequence

MAKLLIPWCCVYLFCFGLIFLKSNAASVTYNVLSFGAKSDGKSDATQPFVKAWVAACSSV
KSATIYVPGGQYLIKAATFRGPCKSKITVKIDGTLVAPSDYRAVGNSGYWILFIQVNRIS
VIGGTLDGNGAGFWACRKSGKNCPVGARSITFNWANDVEIEGLTSVNSQLMHLVINSCKN
VMVKNVRIIAPELSPNTDGIHVQSSTGVTITGTSIKTGDDCISIGPGTRNLWMEKIQCGP
GHGVSIGSLARDYKEDGVQNVTLINSVFTGSDNGLRIKSWARPSTGFVTNINYQNIIMRN
VDNPIIIDQNYCPNNQGCPGQTSGVKINQVTYQNILGTSATQVAMTFDCSPSNPCSGIKL
QDIKLTYLNGKAQPICKNIRGNTGGIILPHNCLY

Transcript Sequence

Gene sequence data has not been registered.